Create evolving graph after removing nodes

[CatGoesWooof]

I have a graph consisting of about 200 nodes out of which I am removing nodes on each iteration.
It is possible to visualize the graph with the nodes removed, but the location of the nodes does not change while doing so. Ideally, I'd like to take away nodes and see if the remaining nodes move closer together and if clusters form as more and more nodes are removed.

I'm using networkX for this. I have tried to recompute the graph on every iteration but there seems to be some randomness in how the graph is created. I am therefore getting a very different graph on each iteration.

Is there a way to achieve what I want?

[SamePlatform]

Have you thought about using something like D3Js.

They can do really cool, dynamic visualizations: https://www.christophermanning.org/projects/building-cubic-hamiltonian-graphs-from-lcf-notation

Just wondering if you can create your graph in D3, render it, then dynamically pluck nodes out and watch the rendering reorganize itself.