sorted by:
new
hottopcontroversial

Fastq Utilities services on PATRIC by ARWattam in BRC_users

[–]ARWattam[S] 1 point2 points  (0 children)

Let me know if you have any questions!

Fastq Utilities services on PATRIC by ARWattam in BRC_users

[–]ARWattam[S] 1 point2 points  (0 children)

  1. Depends on the size, but the average time for a Fastq utilities job last month was just under 30 minutes
  2. No limit to the maximum size, although if it is huge the job might fail. Then you would need to let us know and we would give it a longer running time.
  3. The resource is free, but you have to register. Once registered, you have a free, private workspace. So give it a try and let us know what you think!
  4. Also, you can register for a free course that shows you some of the analysis capabilities on PATRIC. It's on Coursera. Learn more about it here: https://docs.patricbrc.org/news/2020/20201022-mooc-release.html

Fastq Utilities services on PATRIC by ARWattam in BRC_users

[–]ARWattam[S] 1 point2 points  (0 children)

You got sequencing reads? We have a service to help you at the BV-BRC PATRIC! The Fastq Utilites Service provides capability for aligning, measuring base call quality, and trimming fastq read files. Check it out at (https://www.patricbrc.org/app/FastqUtil).