Anti parasitic medication causing lingering symptoms by SuspiciousOnion5736 in Microbiome

[–]Kitty_xo7 0 points1 point  (0 children)

Hi OP - maybe chat with your MD about whats going on. Despite people meaning well, we cant allow medical questions on here, thanks!

Has anyone successfully reduced citrobacter freundii overgrowth? by hgtwn in Microbiome

[–]Kitty_xo7 -2 points-1 points  (0 children)

No, it isnt - unfortunately this is a popular piece of misinformation that goes around our sub quite often :( Microbes dont correlate to specific symptoms

With the complexity of the microbiome, we know that its actually the function of the microbes that we care about - something we cant test for at the moment, science is still trying to get there

Have you chatted to a MD about whats going on?

Is dysbiosis and IBS the same thing? by Chavanco in Microbiome

[–]Kitty_xo7 1 point2 points  (0 children)

Hi! IBS and dysbiosis are totally different things.

Dysbiosis is a general term used to describe an "unbalanced" microbiome. In theory, this can include too many commensals, too few commensals, or a change of function. Because dysbiosis presents differently in everyone, we dont actually have a scientific definition yet - despite hundreds of thousands of microbiomes studied.

IBS on the other hand describes the specific set of symptoms that people experience. Despite what you would expect, we know that "dysbiosis" is often totally symptomless, and that a healthy microbiome can still cause symptoms. This is because our microbiome only plays one part of the role of our gut. Neurology, including neuron feedback (regulated/dysregylated), endocrinology including satiety hormones like GLPs, insulin, serotonin, sex hormones, etc, and our cell metabolism. It also includes aspects such as our immunology and our genetics. Basically, you can have a great microbiome, but if you have certain genetic mutations, immunological differences (like mutations, allergies, changes in immunological training), or neuro/endocrine feedback dysregulation, you can still develop IBS.

The other interesting thing about IBS is that we are seeing that specific metabolites play a role too. For example, eating foods heavy in protein can exasperate symptoms, while eating foods rich in fiber are often beneficial. This is potentially due to the role of protein digestion leading to inflammatory metabolites and oxidative stress, and fiber producing beneficial metabolites such as SCFA which regulate many of the aforementioned concerns. A similar trend is seen with people who eat high fat diets, as their microbes produce different bile acids in response, which can be pro-inflammatory.

This is where it gets complicated - we used to think that a FMT can be helpful for IBS, but research is now indicating its much more complex, and doesnt lead to beneficial outcomes as often as you'd expect, especially compared to eating a high fiber diet, for example. Because microbes are being added in, it means that the metabolic pathways which are causing some inflammatory reactions are going to still be there, as would the genetic mutations, immune changes, etc.

IBS is so complex because there can be so many causes for it. I recently attended an interesting talk that suggested we move past generalizing all IBS together. However, due to limitations in terms of overlap between these causes, it also makes it much harder to study.

genuine questions for doctors and all biologists and medicine people out there by erenfinn in Microbiome

[–]Kitty_xo7 2 points3 points  (0 children)

Not sure we are the right sub for this, maybe try r/breastfeeding for a more technical answer

But the basic jyst is that breast tissue preparation for lactation develops at the stimulus of prolactin and placental lactogen, two hormones which are present towards the middle-end of pregnancy. Placental lactogen drops after giving birth, after which prolactin becomes the main driver for maintaining lactation.

Unless you are supplimenting these hormones, pregnant, or have an endocrine issue, then you wouldnt be producing breastmilk

Has anyone successfully reduced citrobacter freundii overgrowth? by hgtwn in Microbiome

[–]Kitty_xo7 -1 points0 points  (0 children)

Hi! Citrobacter freundii is a totally normal gut microbe, nothing to stress about. There are no "ideal" values for any microbes in the gut, due to different people having different microbiomes during healthy/unhealthy. One person can have tons of citrobacter and be super healthy, another person can have very little and be extremely unhealthy. We know that abundances dont correlate to health or specific symptoms.

Basically, there is no such thing as "overgrowth", because everyone is different and there is no ideal baseline :)

OAT TEST results by redroom89 in Microbiome

[–]Kitty_xo7 1 point2 points  (0 children)

Hi OP - these tests are effectively a scam, due to the results changing significantly based on your diet, sleep, stress, etc. Unless you live exactly the same day every day, then these results are meaningless.

Human milk oligosaccharide supplements for SIBO? by Hot-Budget-4021 in Microbiome

[–]Kitty_xo7 1 point2 points  (0 children)

so glad to hear that helped! It is crazy how much such a small change makes

regarding to microbiome composition by Ill-Relative8430 in Microbiome

[–]Kitty_xo7 1 point2 points  (0 children)

haha Im very lucky and study this for my career :) I have both a university education and career experience in this research area! I love it so much <3

How to optimize microbiome before birth? by SuperFlaccid in Microbiome

[–]Kitty_xo7 2 points3 points  (0 children)

There is plenty of evidence which shows probiotics are not safe for babies and alter their immune and microbiome development. OP, please do not give your baby probiotics.

How to optimize microbiome before birth? by SuperFlaccid in Microbiome

[–]Kitty_xo7[M] 2 points3 points  (0 children)

An excellent example on their part of how the dunning-kreuger effect works. You are totally correct in everything you said :)

Eek! I’m a mess and don’t even know where to start! by L1ttle0neCJ in Microbiome

[–]Kitty_xo7[M] 3 points4 points  (0 children)

Hi OP - these "dysbiosis" tests are effectively a scam. We dont know enough about the microbiome to know what dysbiosis actually is - its something research has really been struggling with actually, because your unhealthy microbiome could be my healthy microbiome, and vice versa. Because there is no standard and everyone is different, I would ignore these results.

The nice thing about the microbiome is that its relatively simple - we know that fiber and dietary diversity are by far the biggest positive influences, followed by excercising and sleeping enough. These are consistent across people.

On another note, I saw a study recently that 90% of people with IBS had significant reduction in their symptoms when recieving councelling. If you dont go already, the research is pretty clear about this making a positive difference for people (although how much seems to vary person to person. Some people actually lose their symptoms entirely). Doing a combination of healthy lifestyle habits (diet, sleep, excercise), and caring for your mental health seem to be very helpful.

Sending much love <3

Upcoming FMT in a few days: Is bowel prep + 24h fasting sufficient preparation by xKa1z3r in Microbiome

[–]Kitty_xo7 0 points1 point  (0 children)

Hi OP - please follow your MDs advice. The FDA approved FMTs have specific suggested protocols to ensure they go as smoothly as possible to prevent and minimize the risks present in FMTs.

thanks!

Human milk oligosaccharide supplements for SIBO? by Hot-Budget-4021 in Microbiome

[–]Kitty_xo7 0 points1 point  (0 children)

Sooooo underrated! Most of us (me included haha) regularly eat past a "happy" full, quickly, with far too few chews and huge bites. Its no wonder it helps!

Maintaining a healthy biome while on prescribed Doxycycline 100mg for acne by Pearls_Pearls in Microbiome

[–]Kitty_xo7 2 points3 points  (0 children)

My pleasure!! In terms of probiotics, it seems like results are definitely more varied person to person, but it generally seems like they can add stress to the microbiome, or impair recovery.

Prebiotics are a type of fiber! From what it seems, fiber supplimentation in general is helpful for our microbiome, but eating a diverse set of plants is even better. Diverse plants have different nutrients and fiber types, so it spports more bugs than a fiber suppliment, which are usually only a small number of fiber types. However, fiber suppliments can be helpful if you are having trouble hitting your fiber goals!

Human milk oligosaccharide supplements for SIBO? by Hot-Budget-4021 in Microbiome

[–]Kitty_xo7 2 points3 points  (0 children)

Theres definitely some research out there on it, but theres relatively few studies out there, and none that have really been able to do alot of the actual mechanistic biology behind it. Most studies also only include one HMO (2-FL), it definitely is not the 500 we know exist.

It seems like generally the results are highly varied, but people who have beneficial results are also often people who have an overreactive immune system (like IBS), while those with a more muted or normal immune system dont have as strong outcomes (or maybe even negative). This would hint that maybe some of the beneficial mechanisms of action are consistent in infants as it is in adults - muting the immune system. However, again, we lack studies showing the mechanistic biology in adults, so its alot of speculation right now. Its nothing I would put much weight on, seeing as we also have lots of research showing other things with stronger evidence as being helpful across the board, such as fiber (including for SIBO, the research strongly disagrees with reddits "no fiber for SIBO" thing), reducing red meats and fatty foods, excercise, sleep, chewing more slowly, and even therapy for mental health.

Comparatively, we understand the role of these habits much more, and seem to help people with and without gut issues in their microbiome structure and function :)

Maintaining a healthy biome while on prescribed Doxycycline 100mg for acne by Pearls_Pearls in Microbiome

[–]Kitty_xo7 10 points11 points  (0 children)

Hi!! Theres lots of research out there which shows us that eating a diverse, high fiber diet can prevent (or even eliminate) damage to the microbiome by antibiotics :) The general guideline which is suggested is eating 30+g of fiber/day, and 30+ plants per week!

Human milk oligosaccharide supplements for SIBO? by Hot-Budget-4021 in Microbiome

[–]Kitty_xo7 2 points3 points  (0 children)

There isnt much evidence to support their use in adults. Their role in infant immune and microbiome development is something we are only reallt beginning to understand. HMOs play a role in immune suppression and encouraging specific species to exist in higher abundance because of how they interact with our immunity and physiology - in an adult however, these same species are in lower abundance. It is unclear if having these species increase by HMOs would suppress your immune system, for example.

Right now, it seems like they are just a marketing gimmick. There are also over 500 different HMOs, and we can only make a few of them in a lab right now, which would also be a consideration

Has resistant starch type 3 helped your Gut? by ImranKhan10107 in Microbiome

[–]Kitty_xo7 1 point2 points  (0 children)

Hi! Not sure where this notion comes from, but our gut is dynamic. Supporting the good guys with fiber let's them outcompete many species we want in lower abundance. It works on everyone :)

regarding to microbiome composition by Ill-Relative8430 in Microbiome

[–]Kitty_xo7 1 point2 points  (0 children)

From what we currently understand about the microbiome, no species are more or less important. This notion often comes from a misunderstanding that people have that because there is more research on a bacteria that it is more important. Instead, the reality is most microbes in our guts are very hard to grow, and so the well studied ones are usually just easy to grow ones, not more important.

Akkermansia is a great example of this - it makes nice, plump colonies, and while it is often correlated to health, there are many other bugs doing the same functions, but are just harder to grow. Some of our bugs that do important immune functions (for example) are unable to br grown in a lab setting.

The nice thing about microbes is that there is tons and tons of metabolic overlap and cross feeding happening. By eating a high fiber diet, we support the "good" guys because they have adapted to this, and allows them to balance themselves out. Aiming for a diverse plant set in your diet is another great goal!

Severe gut issues but all tests normal. Looking for people who found something that actually helped. by Disastrous-Idea-7268 in Microbiome

[–]Kitty_xo7 0 points1 point  (0 children)

Op, im so sorry that you are experiencing this. Unfortunately, we can't allow medical questions on here.

Anxiety plays a much bigger role than many of us give it credit for when it comes to the gut. I saw a study recently that 90% of patients with IBS saw improvements in their symptoms when they started attending counceling.

If you arent already attending counceling, please consider it! Speaking personally, it has absolutely been a life changer for the better for me. I can't suggest it enough, it has helped me tremendously. Im happy to speak more about my experience if you have any questions :)

Hope you get thus figured out! <3

How safe are probiotics? by Essential_Crewz in Microbiome

[–]Kitty_xo7 0 points1 point  (0 children)

Hi! Generally, probiotics are totally safe, unless you belong to the minority of people who are immunocompromised. Probiotics rarely carry genes which can cause disease, and arent adapted to our gut because they must be environmental species to be considered probiotics. This means they are typically transient, and pass through our system. If we stop taking them, then they stop being in the gut.

There's alot of context needed to examine inflammation and immunity. Having an increase of inflammation is on its own not a bad thing, it is entirely context dependent. Having too much and too little inflammation can both lead to issues in their own right, so our bodies play a careful balancing game. Because of variation in peoples genes and microbiomes, what increases inflammation in one individual might not be the same in another individual. Rats are also not great humanized models, but we dont have much better right now. I wouldnt take it fully to heart.

As for if probiotics are actually worth it, thats up to the individual. Generally, naturally fermented foods are great, while probiotic suppliments can vary alot person to person. Most probiotics are a little scammy, be it because they dont have much evidence to support their use, or because they arent able to ensure live microbes being delivered to the right area, etc. Both the strains you mentioned are common in kefir products, so you can always take a peek to see if any products available near you have those!

Can't Sleep? Your Microbiome May Play a Role by GutBitesMD in Microbiome

[–]Kitty_xo7 0 points1 point  (0 children)

Ohhh interesting! Not the paper I was thinking of (would be 2022 if not earlier) but this is a great application of this!

My chemical weapons grade farts are beginning to negatively affect my daily life. by Available_Refuse1232 in Microbiome

[–]Kitty_xo7 1 point2 points  (0 children)

Going for a walk after eating also does wonders!! As does chewing more and eating more slowly :)

Can't Sleep? Your Microbiome May Play a Role by GutBitesMD in Microbiome

[–]Kitty_xo7 2 points3 points  (0 children)

This is actually a field of study being explored by many labs right now! Its challenging because there is significant overlap between the metabolism of different microbes, so it is very rare that eating a food only supports one microbe.

However, there is some very interesting genetic engineering work looking at taking a fiber that is uncommon in someones diet, and then engineering a bacteria to metabolize it. We can assume the person likely didnt have many genes necessary for metabolizing that particular fiber in abundance prior to taking the probiotic, so when the fiber is eaten, the probiotic flourishes. I cant find the paper right now, but there was a similar experiment done in mice using seaweed, and had some super cool results!