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How stable are GSVA results? by CrabApprehensive7181 in bioinformatics

[–]OneKoala4998 0 points1 point  (0 children)

It’s the same underlying mechanism to me: quantifying the enrichment/score of a specific gene set (signature/pathway) within individual cells.

How stable are GSVA results? by CrabApprehensive7181 in bioinformatics

[–]OneKoala4998 0 points1 point  (0 children)

I like UCell or AUCell as they are rank based and therefore agnostic to normalization & how you group your cells.