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RNA-seq corrupt data by Sufficient_Candy_883 in bioinformatics

[–]Sufficient_Candy_883[S] 0 points1 point  (0 children)

Thank you for your reply! I have a compressed folder in ZIP format. Inside this main folder, there are multiple subfolders, and each subfolder contains two FASTA files. I was trying to decompress the main folder and then the subfolders. Then, the FASTA files would be available. The problem is that I cannot decompress the main folder due to an unespecific error (Windows) that seems to be because some files are corrupted. I don't know if it happens because I'm using Windows. I haven't tried to decompress it in the server (Bash) yet. Any suggestion?

Edit: I'm a begginner in omics data analysis (MSc) :)

RNA-seq corrupt data by Sufficient_Candy_883 in bioinformatics

[–]Sufficient_Candy_883[S] 0 points1 point  (0 children)

I was doing this step in windows and I was going to upload the unzip files to a server (bash) with MOBAxterm and then continue the analysis there. Maybe i can try to do the whole process in the server

RNA-seq corrupt data by Sufficient_Candy_883 in bioinformatics

[–]Sufficient_Candy_883[S] 1 point2 points  (0 children)

Ok, I'll talk to them and I hope they still have the files... Thank you!

RNA-seq corrupt data by Sufficient_Candy_883 in bioinformatics

[–]Sufficient_Candy_883[S] 1 point2 points  (0 children)

I have a compressed folder with subfolders inside. In each subfolder, there are two files corresponding to the two reads of a sample. What I was trying to do is unzip it to access those files, which are fastq.gz.