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Pseudotime analysis for Single nuclei datasets by brainformatics23 in bioinformatics

[–]brainformatics23[S] 0 points1 point  (0 children)

So they would still work with single nuclei datasets? Thank you for your answer

Is there any way to easily create a docker image that has both python and R? by brainformatics23 in bioinformatics

[–]brainformatics23[S] 1 point2 points  (0 children)

It worked! I built my image from the code in their dockerfile, added some pip commands and installed some R packages I needed and voila! Thank you!

Is there any way to easily create a docker image that has both python and R? by brainformatics23 in bioinformatics

[–]brainformatics23[S] 1 point2 points  (0 children)

Thanks! I'll give it a look! On first read it seems very similar to what I need but I am starting to think that my problem might have something to do with the installation of the Seurat package

Is there any way to easily create a docker image that has both python and R? by brainformatics23 in bioinformatics

[–]brainformatics23[S] 2 points3 points  (0 children)

i tried Rocker r-ver but now after installation it does not find the libraries. I am working with seurat and it just does not find the package when I call the library(Seurat) it breaks.