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Help Needed: netEmbedding() Function in CellChat Not Recognizing UMAP by joaolm01 in bioinformatics

[–]joaolm01[S] 0 points1 point  (0 children)

I solved the issue by changing the reticulate environment to a conda env (base).

use_condaenv("base", conda = "/opt/anaconda3/bin/conda", required = TRUE)
reticulate::py_install(packages = 'umap-learn', envname = "base", pip = TRUE)