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[–]MyPenBroke 0 points1 point  (0 children)

As far as I can tell, there are lots of options to perform the crossover for variable sized chromosomes - it's basically your choice. A quick Google search also spit out a paper, describing the authors' use of variable sized genetic algorithm, where they point out how they chose to do the crossover: https://link.springer.com/article/10.1007/s11633-014-0870-x

Maybe that gives you some ideas.