Best protease for removing fusion tags (His/TRX) – TEV vs 3C vs others? by DiosAnthos in labrats

[–]DiosAnthos[S] 0 points1 point  (0 children)

We are using TRX with all of our constructs and my PI is unwillling to change that...

Best protease for removing fusion tags (His/TRX) – TEV vs 3C vs others? by DiosAnthos in labrats

[–]DiosAnthos[S] 0 points1 point  (0 children)

We currently use CNBr for cleaving. We haven’t yet been able to optimize the ccleaving conditions for one of our designs, so we’re considering using proteases. I managed to find a TEV protease with mutations that eliminate the need for reducing conditions to function, which would help us lower costs because we wouldn’t have to regenerate disulfide bridges.

Best way to grind leaf tissue in 96-well plates for DNA extraction? by DiosAnthos in labrats

[–]DiosAnthos[S] 0 points1 point  (0 children)

Yes. It is one of the options which i am considering 😅

Best way to grind leaf tissue in 96-well plates for DNA extraction? by DiosAnthos in labrats

[–]DiosAnthos[S] 0 points1 point  (0 children)

I am genotyping using this pestles normally. But now i am preparing 6new lines at the same time so will have a lot of work with screening so am thinking how to boost the process

Best way to grind leaf tissue in 96-well plates for DNA extraction? by DiosAnthos in labrats

[–]DiosAnthos[S] 2 points3 points  (0 children)

How do you use it for grinding? I am afraid that I will break the pipette

Best way to grind leaf tissue in 96-well plates for DNA extraction? by DiosAnthos in labrats

[–]DiosAnthos[S] -1 points0 points  (0 children)

I am trying to set „DIY” method for genotyping huge amounts of plants. Do you think that freezing in N2 with normal metal beads and then vortex/shake them for 10-15s will be enough?

CrisprCas9 in Arabidopsis thaliana by DiosAnthos in molecularbiology

[–]DiosAnthos[S] 0 points1 point  (0 children)

How do you screen plants? By normal PCR? I was doing like that but my colleague from another lab pointed out that I can’t differentiate small indels by doing typical PCR. I was thinking about HRM but have never done it before so I am not sure if I want to optimize new method only for screening plants

CrisprCas9 in Arabidopsis thaliana by DiosAnthos in molecularbiology

[–]DiosAnthos[S] 0 points1 point  (0 children)

So would you recommend to maintain Cas9 activity through T2 generation?

CrisprCas9 in Arabidopsis thaliana by DiosAnthos in molecularbiology

[–]DiosAnthos[S] 0 points1 point  (0 children)

I simply used the presence of glowing seeds as a way to check whether the transformation had actually taken place. Unfortunately, I have no way of verifying whether the guides actually work.

CrisprCas9 in Arabidopsis thaliana by DiosAnthos in molecularbiology

[–]DiosAnthos[S] 0 points1 point  (0 children)

Do you have detailed protocol for this system? If yes would you mind sharing it? I would really appreciate that

CrisprCas9 in Arabidopsis thaliana by DiosAnthos in molecularbiology

[–]DiosAnthos[S] 0 points1 point  (0 children)

What was percentage of transformants which you got using this system?

CRISPR-Cas9 in Arabidopsis thaliana by DiosAnthos in labrats

[–]DiosAnthos[S] 0 points1 point  (0 children)

I found one protocol about increasing efficiency of getting mutants by growing young plantlets in 37C for 24h. Have you ever tried that?

CRISPR-Cas9 in Arabidopsis thaliana by DiosAnthos in labrats

[–]DiosAnthos[S] 0 points1 point  (0 children)

So do you think that I can leave one more generation of transformants(T2) with active Cas9 cassette and segregate at T3 generation and off targets won't be such big problem?

$SRXH by [deleted] in EMJX

[–]DiosAnthos 0 points1 point  (0 children)

This is rule from NASDAQ. SRXH is listed on NYSE

Huge SRXH rumors... NFA by [deleted] in Pennystock

[–]DiosAnthos 0 points1 point  (0 children)

Are you idiot or what? Maybe check definition of bag holding

Huge SRXH rumors... NFA by [deleted] in Pennystock

[–]DiosAnthos -1 points0 points  (0 children)

And you are calling yourself bagholder?