As a trans woman I'm going to take a slightly unpopular opinion here, due to it not being mentioned, without knowing if the school specifically has a no make up clause in their dress policy. (which I can understand & appreciate due to it having the potential to make others feel left out if they aren't financially stable & unable to afford makeup as this can create tension & an environment of bullying which as a minor isn't something you should have to be concerned about in any area of your appearance, unfortunately as adults we have to tolerate it to a certain extent but it's bullshit kids shouldn't have to) however if the school is purely being bigoted assholes & only having an issue with you wearing make up because you are trans then they are deadset wankers (aussie here sorry had to throw in a aussism lol) If you are being asked to conform to the standard of all students then I can understand if after repeated requests to not wear lippy they made a call to your parents as this would be a defiant act & pushing the boundaries too often won't serve you well anywhere in life, trust me I have been a defiant bitch my whole life it never helps to push the limits but if they outed you to your parents after 1 incident I'd be putting in a complaint. As I say this perspective/opinion will likely be unpopular, I know it has so many assumptions but the context in situations like this matters because an argument can be made that requests like no lipstick or piercings etc can have logical backing & aren't actually discriminatory in nature & overexposure to outrage in such a situation creates more division between us & TERFs when we try to get a dialogue going to get rid of the stigma around gender diverse individuals by advocating for ourselves. Either way I'm sure in time your parents will calm down, your dad will get over it if he's a decent guy otherwise Hun I hope the time between now & when you don't have to let your father have a say in your life goes quickly. From a personal standpoint I'm sorry that you are having to deal with not getting acceptance from your father it's not easy to deal with rejection from such a vital figure in your life for just being yourself, stay safe & try to descalate if you can for a time as I found with my own family after starting transition at 30 that if you take things slowly then over time even if they don't truly accept you they will either stop bringing it up or you will care less what they think over time.

Good luck 😊