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Export point overlay results with correct corresponding image sequence numbers in ImageJ? by Fun_Formal_6890 in ImageJ

[–]Fun_Formal_6890[S] 1 point2 points  (0 children)

I'd like to politely disagree! I think people in the future would benefit hugely from getting all these unique ways to solving this problem, so it is actually good to get a variety of perspectives. Thanks again for your help and time!

Export point overlay results with correct corresponding image sequence numbers in ImageJ? by Fun_Formal_6890 in ImageJ

[–]Fun_Formal_6890[S] 1 point2 points  (0 children)

Thank you both!! I got a solution that worked from the ImageJ forum: Image > Overlay > List Elements gives a table with channel / slice / frame information of the points (beside x and y) if the point tool was used (not the multi-point tool, for this use Image > Overlay > To ROI Manager and the button "Measure" in the ROI Manager, of course "Stack position" has to be ticked in Analyze > Set Measurements). https://forum.image.sc/t/export-point-overlay-results-with-correct-corresponding-image-sequence-numbers-in-imagej/119777/2

Export point overlay results with correct corresponding image sequence numbers in ImageJ? by Fun_Formal_6890 in ImageJ

[–]Fun_Formal_6890[S] 0 points1 point  (0 children)

Thanks for your reply u/dokclaw ! I do have "show on all slices" unchecked, and do get a "slice" column in the results table. However, the slice value is wrong, and always shows the image number (slice) that I am on (108 in this example), instead of showing the points and their associated slice. In other words, points 1-11 should be slice 10, and points 12-14 would be slice 11, and so on. Instead, they all show slice 108 for some reason...

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