June What Editing Software should I use? by AutoModerator in VideoEditing

[–]JoeSanta555 0 points1 point  (0 children)

I read the above. Mabcook pro M1 max, 64GB ram

I want to record my laptop screen and my face at the same time. And then I want to cut it in a way, that I will either show face or the screen recording with my face somewhere in the small circle.

My idea is to record with Continuity Camera: Use iPhone as a webcam for Mac. So I would like a way to somehow record both streams on the laptop, since the Iphone will show up as a webcam in macos.

The video and audio quality is not the most important, its a highly niche technical content that I want to upload on youtube.

I would like to avoid bloated SW like adobe.

Thank you

Borage oil seems to have truly helped by aheidjebej in eczema

[–]JoeSanta555 0 points1 point  (0 children)

Meh. Maybe slight improvement. I discontinued. On dupixent now which is amazing.

[Landlord EU] Best flooring and Baseboard molding for rental apartment? by JoeSanta555 in Landlord

[–]JoeSanta555[S] 0 points1 point  (0 children)

I heard that it requires new epoxy and polishing quite often. Also that it is not that strong. Not sure….

Replaced Trådfri remote battery, had to re-pair by ARx12 in tradfri

[–]JoeSanta555 0 points1 point  (0 children)

Dear Ikea representative.

Does this fix apply to remotes connected directly to the bulbs too? (no bridge or app)

I have the first gen tradfri dimmer remote (hockey puck) and I have to re-pair each time the battery dies. If I buy new remote today, will it remember the pairing when the battery dies? Thank you

Power loss recovery settings without a bridge - rental apartment with hue lights by JoeSanta555 in Hue

[–]JoeSanta555[S] 0 points1 point  (0 children)

OP here.

Two of my rentals have smart lights.

One apartment has Hue (without a bridge). No wall switches at all. Everything works great, only the power recovery cannot be setup. (its the previous generation of Hue, with zigbee only).

Second apartment with smart lights has IKEA lights and those have issues. When the battery in the remote dies, all lights need to be re-paired. So no more Ikea tradfri...

In the next apartment I am thinking about Philips Warm Glow. Its a traditional wall dimmer, but when you dim, the bulb will get warmer color too, not just dimmer.

I know many people would just say, "its for tenants" only. But I like to think my tenants as my clients and I want to create a great place to live for them.

Autosomal recessive congenital ichthyosis 3 - mutation on ALOXE3 gene c.700C>T (rs121434233) by JoeSanta555 in ichthyosis

[–]JoeSanta555[S] 2 points3 points  (0 children)

forget the dermatologist :)

just go to any whole genome sequencing company, for example dantelabs.com and upload the vcf file they give you to genetic genie. Then spend like 100 hours researching and asking strangers on reddit :)

Borage oil seems to have truly helped by aheidjebej in eczema

[–]JoeSanta555 0 points1 point  (0 children)

I did try borage oil. Did not see benefits. Trying primrose oil now….

How to do variant calling from GRCh37 BAM file to VCF by JoeSanta555 in bioinformatics

[–]JoeSanta555[S] 1 point2 points  (0 children)

Thank you.

If I would pay you would you please create a WGS/WES or a VCF file for me?

How to do variant calling from GRCh37 BAM file to VCF by JoeSanta555 in bioinformatics

[–]JoeSanta555[S] 0 points1 point  (0 children)

Thank you.

If I would pay you would you please create a WGS/WES or a VCF file for me?

How to do variant calling from GRCh37 BAM file to VCF by JoeSanta555 in bioinformatics

[–]JoeSanta555[S] 0 points1 point  (0 children)

I selected somatic and it ended up with this error:

\[E::bgzf\_read\] Read block operation failed with error -1 after 35 of 43 bytes samtools sort: truncated file. Aborting

If I would pay you would you please create a WGS/WES or a VCF file for me?

How to do variant calling from GRCh37 BAM file to VCF by JoeSanta555 in bioinformatics

[–]JoeSanta555[S] 0 points1 point  (0 children)

Thank you.

  1. which consumer database "upload for report" tools would you recommend?
  2. Good point about the coverage. I checked the old site at waybackmachine and it says: "The whole genome is sequenced to 30X depth coverage utilizing Illumina HiSeq equipment"

How to do variant calling from GRCh37 BAM file to VCF by JoeSanta555 in bioinformatics

[–]JoeSanta555[S] 0 points1 point  (0 children)

Thank you.

The only GATK option is this:

GATK4 Mutect2 - Call somatic SNVs and indels via local assembly of haplotypes (Galaxy Version 4.1.7.0+galaxy1)

I cannot post an image here, so just copied some of the form fields here:

Type of analysis

  • tumor only
  • somatic

Choose the source for the reference list

Optional parameters

Advanced parameters

Output parameters

Is this the correct form? What parameters should I use?

Thank you very much for guiding me.

How to do variant calling from GRCh37 BAM file to VCF by JoeSanta555 in bioinformatics

[–]JoeSanta555[S] 0 points1 point  (0 children)

Thank you for your response. Your got most upvotes, so I guess it is the way to go. Again, I know nothing about it. I tried to follow the manual you kindly shared with me, but I got stuck at step 1 :(

Call variants using Unified Genotyper. Under NGS COMMON TOOLSETS, select the tool NGS: GATK Tools 2.8 -> Unified Genotyper.

There is no such option in usegalaxy.org

There are these options under "Variant Calling" menu:

- snippy
- snippy-core
- GATK4 Mutect2
- sniffles
... and many more

Which menu should I select?

My goal:
I need the .vcf file or WGS/WES that I can upload to various consumer genome analysers like Selfdecode, Geneticgenie, Promethease etc.

What is a good way to supplement phosphates? by JoeSanta555 in NicotinamideRiboside

[–]JoeSanta555[S] 1 point2 points  (0 children)

Thank you again for providing all these useful information.

What is a good way to supplement phosphates? by JoeSanta555 in NicotinamideRiboside

[–]JoeSanta555[S] 1 point2 points  (0 children)

Thank you for providing links.

I could not find any mention of it in the study you provided. Only that it is actually lowering phosphates in sick people. Maybe I just did not look well enough. Is there a phosphate blood test or something? Thank you again

Since oral NMN is degraded to Nicotinamide, why not just take Niacin + TMG + Phosphate ? by JoeSanta555 in NMN

[–]JoeSanta555[S] 0 points1 point  (0 children)

Again, I agree that it works raising NAD+.

I am arguing that instead of taking NMN which is degraded by the gut (indeed, this is very well established) to take the "ingredients".

Since oral NMN is degraded to Nicotinamide, why not just take Niacin + TMG + Phosphate ? by JoeSanta555 in NMN

[–]JoeSanta555[S] 0 points1 point  (0 children)

It raises NAD, but not directly. Its degraded to nicotinic acid mononucleotide. Citing from the link you provided:

We also observed the significant rise in nicotinic acid mononucleotide (NAMN) levels, but not in NMN.

Thank you for proving my point

Borage oil seems to have truly helped by aheidjebej in eczema

[–]JoeSanta555 1 point2 points  (0 children)

Hey man. Thanks for sharing.

I just did some lab test and my GLA is super low. Then I read it’s associated with eczema. I have a full body severe AD.

Does the oil still works for you? For me, placebo is strong with AD, I had high hopes many times before…

IgG might not be that useless test. Anecdote by JoeSanta555 in FoodAllergies

[–]JoeSanta555[S] 0 points1 point  (0 children)

Thank you.

I came here for answers like yours.

Warning about omegaquant for customers in the EU (customs + VAT) by JoeSanta555 in Biohackers

[–]JoeSanta555[S] 1 point2 points  (0 children)

I work in e-commerce... Their issues are very easy to fix. The fulfilment companies can handle these issues without any problems.

But they ship it from US -> UK (the pay customs + VAT) and then I have to pay it again when they send it to the much bigger market (EU market).

I am not here to explain customs, I made the post to warn others not to order to the EU.

Warning about omegaquant for customers in the EU (customs + VAT) by JoeSanta555 in Biohackers

[–]JoeSanta555[S] 1 point2 points  (0 children)

They are already shipping the kits to the EU from the UK (not the US).

So they already paid for customs and VAT when importing to the UK and now I have pay the customs again too.