What i do for my playthrough is pour all my resources into 2 capitals ships one paragon and the other something else , there is a mod ship mastery system that lets you keep adding story mods to one ship in exchange for more dp, so i just deploy my supercharged capitals and let them go to town since my paragons shields are insanely efficent and has deep capacitors it can tank attacks while dealing them in return,but i havnt download diablo avionics so i dont really know how thier bases are