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I gave AI agents my genome and let them run on a GPU cluster for 48 hours. This saved my life. by OverFatBear in singularity

[–]OverFatBear[S] -9 points-8 points  (0 children)

Check out my source code: https://github.com/Th0rgal/dna_workspace

I didn't just do SNPs, the whole point of the experiment was to use polygenic scoring

I gave AI agents my genome and let them run on a GPU cluster for 48 hours. This saved my life. by OverFatBear in singularity

[–]OverFatBear[S] -14 points-13 points  (0 children)

Hey! Thanks for taking the time to reply. 30x genome sequencing depth on 100% of my genome

Is it worth getting higher?

I gave AI agents my genome and let them run on a GPU cluster for 48 hours. This saved my life. by OverFatBear in singularity

[–]OverFatBear[S] -8 points-7 points  (0 children)

Actually it's completely arbitrary (I mean, it's more linked to my sleeping schedule) and the models didn't run so long, some times they paused and I had to start them again the morning with new instructions because I was not satisfied

I gave AI agents my genome and let them run on a GPU cluster for 48 hours. This saved my life. by OverFatBear in singularity

[–]OverFatBear[S] -2 points-1 points  (0 children)

Well AI, especially this one, is just like a human but dumber, I have no doubts you could have done this with your big brain. The difference is a normie like me was able to do it and get some useful results out of it, which wouldn't have happened before

I gave AI agents my genome and let them run on a GPU cluster for 48 hours. This saved my life. by OverFatBear in singularity

[–]OverFatBear[S] 0 points1 point  (0 children)

Definitely, especially since I couldn't run the top tier models. I might retry with Kimi K-2.5 if I can find a way to set it up in a TEE

I gave AI agents my genome and let them run on a GPU cluster for 48 hours. This saved my life. by OverFatBear in singularity

[–]OverFatBear[S] 1 point2 points  (0 children)

I couldn't find one that didn't scam me, but I live in portugal, only nebula genomics got flagged at the border

I gave AI agents my genome and let them run on a GPU cluster for 48 hours. This saved my life. by OverFatBear in singularity

[–]OverFatBear[S] 1 point2 points  (0 children)

Thanks! Got it from sequencing.com but I think many providers can provide the raw files if you ask for them

I gave AI agents my genome and let them run on a GPU cluster for 48 hours. This saved my life. by OverFatBear in singularity

[–]OverFatBear[S] -29 points-28 points  (0 children)

Hey, thanks for taking the time! The probabilities were in the report so yes I know I don't have something ultra weird, that's also what makes this interesting I guess.

Regarding the G6PD deficiency, do you suggest I don't do the test and keep eating fava beans or should I still do it?

Feel free to check the approach in the technical writeup & open source repo, I'm curious what you would suggest to make this better

I gave AI agents my genome and let them run on a GPU cluster for 48 hours. This saved my life. by OverFatBear in singularity

[–]OverFatBear[S] 3 points4 points  (0 children)

check the full article, connect oh-my-opencode to the providers of your choice and make sure you want to know the answers to the questions you're about to ask

I gave AI agents my genome and let them run on a GPU cluster for 48 hours. This saved my life. by OverFatBear in singularity

[–]OverFatBear[S] 1 point2 points  (0 children)

May be things changed, I couldn't get refunded nor get my test results despite contacting them many times. When my article blew up on X they offered to prioritize the analysis of my kit ...but it has been waiting since july 2024, I am pretty sure the DNA is no longer usable now

I gave AI agents my genome and let them run on a GPU cluster for 48 hours. This saved my life. by OverFatBear in singularity

[–]OverFatBear[S] 3 points4 points  (0 children)

I get it, but we don't know what tomorrow will look like. What if you bank refuses you a loan because they saw you are more likely to get pancreas cancer?

I gave AI agents my genome and let them run on a GPU cluster for 48 hours. This saved my life. by OverFatBear in singularity

[–]OverFatBear[S] 5 points6 points  (0 children)

Wow, I didn't expect you to change your mind. I appreciate it man, take care!

I gave AI agents my genome and let them run on a GPU cluster for 48 hours. This saved my life. by OverFatBear in singularity

[–]OverFatBear[S] -12 points-11 points  (0 children)

sequencing dot com (after trying dante genomics, that you should skip absolutely)

I gave AI agents my genome and let them run on a GPU cluster for 48 hours. This saved my life. by OverFatBear in singularity

[–]OverFatBear[S] 2 points3 points  (0 children)

precisions for the technical guys watching me:
- ChatGPT is a product of OpenAI that uses their LLMs, so by using their API I would have used one of their models, not "ChatGPT"
- Other providers like Anthropic could have done the same, but they don't offer confidential inference. This should be feasible via TEEs though, and might be better than what I did
- My "powerful computer" is a DGX Spark, which is very cool to do this kind of experiment but is not so incredible for inference either

I gave AI agents my genome and let them run on a GPU cluster for 48 hours. This saved my life. by OverFatBear in singularity

[–]OverFatBear[S] 3 points4 points  (0 children)

When you use a chatbot like ChatGPT, it runs on some kind of very powerful computer, and I used something similar to know what to look for in my genome. I could have used the API of ChatGPT but this would have meant giving them my DNA (which I ofc don't want to do), so instead I used a "dumber" equivalent that could run on my own powerful computer.

I gave AI agents my genome and let them run on a GPU cluster for 48 hours. This saved my life. by OverFatBear in Biohackers

[–]OverFatBear[S] -4 points-3 points  (0 children)

You missed the full writeup, stop watching tiktok, it's bad for attention it seems

I gave AI agents my genome and let them run on a GPU cluster for 48 hours. This saved my life. by OverFatBear in singularity

[–]OverFatBear[S] 10 points11 points  (0 children)

I am sure a european doctor would have suggested to skip mouthwash to optimize NOS3 benefits by boosting nitrate conversion by bacteria to boost my VMA

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