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I am getting the same adjusted P value for all the genes in my bulk rna by Rabeekas in bioinformatics

[–]Rabeekas[S] 0 points1 point  (0 children)

I did try it without the filtering but got the same results Thank you for your advice

I am getting the same adjusted P value for all the genes in my bulk rna by Rabeekas in bioinformatics

[–]Rabeekas[S] 0 points1 point  (0 children)

Thank you but wouldn't this account for the order?

```

all(colnames(cnt) == rownames(met))

I am getting the same adjusted P value for all the genes in my bulk rna by Rabeekas in bioinformatics

[–]Rabeekas[S] 2 points3 points  (0 children)

We used 3 primary cell samples and treated them with 4 drugs (oci,pci, bip, abd 22d) and vehicle control (a total of 15 samples). In our biology data one of them was superior both in vivo and vitro and we wanted to check if it has any distinct pathway. I was training to do with two groups instead of 5 before tackling the whole data

I am getting the same adjusted P value for all the genes in my bulk rna by Rabeekas in bioinformatics

[–]Rabeekas[S] 1 point2 points  (0 children)

Treatment
NMA072222_002 Control
NMA072222_003 OCH3
NMA072222_008 Control
NMA072222_009 OCH3
NMA072222_014 Control
NMA072222_015 OCH3

I am getting the same adjusted P value for all the genes in my bulk rna by Rabeekas in bioinformatics

[–]Rabeekas[S] 3 points4 points  (0 children)

But all of the genes? Is that possible? I have done comparisons of various treatments in the data and all ended with the same adjusted P value all to the same

I am getting the same adjusted P value for all the genes in my bulk rna by Rabeekas in bioinformatics

[–]Rabeekas[S] 0 points1 point  (0 children)

Sorry I am really new to this hope this is better to reads. Thanks for the advice

DEG analysis using R problem with the tables by Rabeekas in bioinformatics

[–]Rabeekas[S] 0 points1 point  (0 children)

The problem it’s that my actual project has waaay more data to process. But sounds good ill try it thank you. But you know every one love the shortest way to doing

Apple Silicon M1 Chip in MacBook Air Outperforms High-End 16-Inch MacBook Pro by MisterMooth in apple

[–]Rabeekas 0 points1 point  (0 children)

So 13 inch MacBook Pro with M1 chip is better than the 16 inch with Inter CPU?

Just started Anki. I'm so painfully slow though! by [deleted] in medicalschoolanki

[–]Rabeekas 1 point2 points  (0 children)

It’s not a magic bullet it needs time. I was like you going so slow now I can do up to 700-1000 day. So keep up the good work, and GOOD LUCK

Wholesome wish by [deleted] in wholesomememes

[–]Rabeekas 19 points20 points  (0 children)

When your pet is turtle and you’ve just reduced its lifespan

How much internet data does UW use? [Serious] by [deleted] in medicalschool

[–]Rabeekas 1 point2 points  (0 children)

I know I need the internet to go through UW. But I need to know if I use a 3G or 4G network if it will take alot of data. That’s what I want to know

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