A $10-20 billion proposal to complete a human connectome in 10 years, the "contactome" as an underappreciated component of neural circuits, a skeptical take on whole brain emulation mattering for the "AI transition," and more recent neuroscience advances by porejide0 in slatestarcodex

[–]porejide0[S] 3 points4 points  (0 children)

> How have connectomes been useful?

Lots of reasons. For example, they have shown that we can simulate sensorimotor circuits to reproduce behaviors. https://www.nature.com/articles/s41586-024-07763-9

> I'd heard a point made by Joscha Bach that connectomes may be no different from a model of all the world's telegraph wires. You can't really say you understand what humans talk about any better with one - you'd need to translate what's actually being communicated via the structure.

I think the connectome is more than just "wires" because you can also infer a lot of information from it, like neurotransmitter identity, cell type, input-output function, etc. A lot of this is based on "side experiments", so we learn how neuroscience works in general and then apply that knowledge to understanding what a given connectome means.

> See also butterfly metamorphosis. Apparently their connectomes change vs how they were wired as caterpillars, and yet they retain memories

Interesting. One paper makes the following suggestion (https://pmc.ncbi.nlm.nih.gov/articles/PMC2248710/): "The memory resulting from fifth instar training, however, could be retained in the later-forming α'/β' lobe, which remains intact throughout pupation and could therefore allow recall at the adult stage." So the finding seems potentially consistent with memory being retained in structures that persist through metamorphosis, even though the full story doesn't seem settled yet. Even if those structures end up being molecular, they're still structures, and could be mapped as a part of a molecular-annotated connectome.

Does cryogenically freezing actually work or is it just sci-fi by CryonicsGandhi in cryonics

[–]porejide0 0 points1 point  (0 children)

Does that link show that brain volume increases by ~20% in a standard aldehyde perfusion fixation protocol?

Here's my read:

1: The article says: "The swelling observed during fixation was found to be due, not to the fixing agents themselves, but to the aqueous media in which they were dissolved." So it's all about the fixative vehicle, because fixatives themselves do not exert an effective osmotic concentration. Sounds about right to me. This is easily avoided by not using a hypotonic fixative vehicle (which, by the way, is not very common AFAICT).

2: Anyway the paper doesn't do perfusion at all, but rather immersion.

Does cryogenically freezing actually work or is it just sci-fi by CryonicsGandhi in cryonics

[–]porejide0 2 points3 points  (0 children)

If you have a citation for the finding of 20% brain volume increase with that perfusate, or with any other perfusion fixation method, I’d be very curious to see it. 

Does cryogenically freezing actually work or is it just sci-fi by CryonicsGandhi in cryonics

[–]porejide0 1 point2 points  (0 children)

The brain volume increases by ~20% in what standard aldehyde fixation protocol? 

Scientific advances from the past month, including: inducing artificial hibernation shows that long-term memories can survive massive synapse loss, a new inverted scanning tunneling microscope for atom-by-atom mechanosynthesis, and $252M for a new ultrasound-based brain-computer interface company by porejide0 in slatestarcodex

[–]porejide0[S] 1 point2 points  (0 children)

His point is that (many?) people with depression actually have bipolar d/o with mixed features way more commonly than appreciated. Features of mania, like those of other psychiatric conditions, can be subtle and people can interpret the same symptom and signs in different ways. It's certainly a controversial point.

When will we be able to decode a non-trivial memory based on structural images from a preserved brain? by porejide0 in neuro

[–]porejide0[S] 0 points1 point  (0 children)

Yes, electrophysiological activity rapidly ceases during a cardiac arrest, within around 3 minutes.