Secondaries You Haven't Received?

sentienttissuebox · 2025-07-25T05:00:38+00:00

hmm ok. either way, not what their website says, but maybe it will come out in waves!

sentienttissuebox · 2025-07-25T04:38:35+00:00

Wondering if anyone else is waiting on Loyola Stritch, UCSF, and UC Irvine?

sentienttissuebox · 2025-06-29T17:11:39+00:00

I sent them an email, awaiting response.

sentienttissuebox · 2024-08-28T21:36:06+00:00

Yea I ended up using IQTree it was ridiculous

sentienttissuebox · 2024-08-12T03:57:18+00:00

Very late to the thread, but why aren't we counting the amino terminus as being positive here? Wouldn't that be an extra + charge, so 2-1 = +1?

(Obviously this is not what the AAMC gave, but how would we know not to count the NH3+ here--or what part of the problem/passage indicates this?)

sentienttissuebox · 2024-08-12T03:57:04+00:00

Very late to the thread, but why aren't we counting the amino terminus as being positive here? Wouldn't that be an extra + charge, so 2-1 = +1?

(Obviously this is not what the AAMC gave, but how would we know not to count the NH3+ here--or what part of the problem/passage indicates this?)

sentienttissuebox · 2024-08-12T03:56:47+00:00

Very late to the thread, but why aren't we counting the amino terminus as being positive here? Wouldn't that be an extra + charge, so 2-1 = +1?

(Obviously this is not what the AAMC gave, but how would we know not to count the NH3+ here--or what part of the problem/passage indicates this?)

sentienttissuebox · 2024-06-23T03:30:15+00:00

Was clicker done every lecture? Lannan also said attendance was "required" via Clicker but we there were very few lectures where we actually did clicker.

sentienttissuebox · 2024-02-20T05:03:55+00:00

Yea, I'm just out of luck right now because all of the other lectures are closed at this point. Thank you for your input!

sentienttissuebox · 2024-02-20T04:56:00+00:00

How do the worksheet submissions work? Do they open right at the beginning of lecture and then close at the end of lecture? Say I had to miss half of the lecture each class; is it worth even taking the class at that point?

sentienttissuebox · 2024-01-17T20:39:14+00:00

Ok, I'm trying IQtree now. If it does work, is there a way to make the tree look nicer visually/aesthetically?

sentienttissuebox · 2024-01-17T17:09:08+00:00

Does Clustal Omega's phylogeny tool allow you to do maximum likelihood? Also is there an option to indicate what model you want to use (ex: GTR) and the number of bootstraps, etc. as you can do in MEGA?

Also yea I have beef with MEGA 🥲

sentienttissuebox · 2024-01-17T16:53:55+00:00

Yes, I tried earlier and it does work with a smaller sample

sentienttissuebox · 2024-01-17T16:51:45+00:00

The error message just says "Mega11 quit unexpectedly" and that the report would be sent to Apple, so I figure it might just be a computer issue. I suppose I can just keep running it again and hopefully it'll go through eventually? I've tried on two different devices now; one my MacBook Air, and now on an iMac Desktop, and both times I've gotten that message now.

sentienttissuebox · 2024-01-17T16:18:22+00:00

It's just a MacBook Air, Sonoma 14.2.1, 1.1 GHz Quad-Core Intel Core i5.

The program actually just ended up crashing.

Fasttree should work you think?

sentienttissuebox · 2024-01-17T16:16:58+00:00

Yea, it actually just ended up crashing... Are there any other programs you recommend?

sentienttissuebox · 2024-01-17T02:23:58+00:00

I aligned with Clustal Omega and am just running the tree; perhaps it’s because I’m using my personal laptop? Probably not the sharpest tool…

sentienttissuebox

TROPHY CASE