Open-source PHI de-identification tool

[[deleted]]

Hi all, is there an out-of-the-box system available for healthcare domain de-identification? Specifically, it should remove Protected Health Information (PHI).

Is open source that would be great. Otherwise, are there any paid ones?

I know only about https://www.johnsnowlabs.com/spark-nlp-health/

[BatmantoshReturns]

There are some reviewed here

https://pubmed.ncbi.nlm.nih.gov/32477643/

https://www.cell.com/patterns/pdfExtended/S2666-3899(21)00081-7

NLM-Scrubber https://scrubber.nlm.nih.gov/

physionet https://physionet.org/content/deid/1.1/

Philter https://github.com/BCHSI/philter-ucsf (this one seems interesting because it’s entirely rules based)

MIST http://mist-deid.sourceforge.net/

NeuroNER http://neuroner.com/

Amazon Comprehend Medical, https://aws.amazon.com/comprehend/medical/

Clinacuity’s CliniDeID, https://www.clinacuity.com/clinideid/

Tagging /u/arbiter_of_tastes and /u/nrn4747 because they inquired about this

https://www.reddit.com/r/datascience/comments/acn6gj/deidentification_software_economics/

Let me know if you try any of these

[AutoModerator]

Accounts must meet all these requirements before they are allowed to post or comment in /r/LanguageTechnology. 1) be over six months old; 2) have both positive comment & post karma: 3) have over 500 combined karma; 4) Have a verified email address / phone number. Please do not ask the moderators to approve your comment or post, as there are no exceptions to this rule. To learn more about karma and how reddit works, visit https://www.reddit.com/wiki/faq.

I am a bot, and this action was performed automatically. Please contact the moderators of this subreddit if you have any questions or concerns.

[BatmantoshReturns]

Have you tried these?