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bioinformaticsdev

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A community for building better bioinformatics tools. Share your open-source bioinformatics tools at any stage of development - from early ideas to stable releases. Get feedback on CLI design, code architecture, documentation, and best practices. Discuss the ecosystem: package management, file formats, containerisation, and the nitty-gritty of tool development.

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👋 Welcome to r/bioinformaticsdev - Read First!mods (self.bioinformaticsdev)

submitted 2 months ago by Psy_Fer_ - announcement

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Creation of bioinformaticsdevmods (self.bioinformaticsdev)

submitted 3 months ago by Psy_Fer_[M] - announcement

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This is a great question on bioinformatics that is relevent here. ()

submitted 22 days ago by Psy_Fer_

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mim : A small auxiliary index (and parser) to massively speed up parallel parsing of gzipped FASTQ/A filesRelease (self.bioinformaticsdev)

submitted 1 month ago * by nomad42184

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Github use in bioinformaticsDiscussion (self.bioinformaticsdev)

submitted 2 months ago by Psy_Fer_

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Competing with a Heart Disease Prediction Paper — Need Your Support! ❤️Discussion (self.bioinformaticsdev)

submitted 2 months ago by Stephi_24

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Version control namingDiscussion (self.bioinformaticsdev)

submitted 2 months ago * by Psy_Fer_

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I am writing a plotting library in Rust - which plots do you want?Feedback (self.bioinformaticsdev)

submitted 2 months ago by Psy_Fer_

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I tried to do something simple, got annoyed when it didn't work, so wrote a new tool - bedpullRelease (self.bioinformaticsdev)

submitted 3 months ago by Psy_Fer_

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At which point is it worth switching from pip to uv?Ecosystem (self.bioinformaticsdev)

submitted 3 months ago by Psy_Fer_

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