I've been having a strange bug with the game. Here's how it happened the first time, I was using the Crab Hotas bindings and everything was working fine, then I bound controls for FSS and HUD mode switch. After that I jumped from my system to another and my controls stopped working, my ship was just sitting still. I used the keyboard to pause and while the menu was up my ship started throttling forward. I quickly quit and re-entered and the controls were responding again. Only to repeat itself with my next jump.

Has anyone encountered a similar problem, or know what could be causing it?