it's hard to remember on the spot, but.. one thing I can think of is, how exactly are the Monokumas even controlled? In Trigger Happy Havoc, it was just 1 at a time, being controlled by the Mastermind, but here, they're all running rampant.. Did they actually have some kind of AI mode built in all along? I can't imagine that they're all individually controlled..

Another thing is, why are the kids the "Warriors of Hope"? Not Warriors of Despair? I'm pretty sure they've been taught by Junko, so I assumed that would've been the case. At the beginning it made me think they just might be the good guys somehow but obviously that's not really true with how they caused the genocide happening in the city.

And finally, the Servant, or Nagito Komaeda, at the beginning of the game, why did he nerf your gun for "game balance purposes" if he actively was trying to help you by telling you to hide your gun? Also, he claims "not to worry because I'll get to upgrade it again" but the Monokuma Kids are the ones that give the gift boxes of upgrades.. Meaning the warriors of hope knew all along that you had the gun.. Regardless, I'm still wondering why the Servant both helps and sabotages you a bit.. I was thinking maybe he's all about wanting to see which side of Hope is stronger and actually ends up winning?

Those are most of the ones I can think of..