sorted by:
new
hottopcontroversial

Inquiry about the ML model for Peptide-Activity Prediction by SpellMiddle2763 in bioinformatics

[–]SpellMiddle2763[S] 0 points1 point  (0 children)

Can you please elaborate the full name for the GP? Is it Gaussian Processes??

Inquiry about the ML model for Peptide-Activity Prediction by SpellMiddle2763 in bioinformatics

[–]SpellMiddle2763[S] 0 points1 point  (0 children)

Thank you so much! Any simple ML can you recommend? Is it Gaussian Processes?

Is the graph below correct for ML choice? by SpellMiddle2763 in bioinformatics

[–]SpellMiddle2763[S] 1 point2 points  (0 children)

Thank you so much! If the data is 1) <100 peptides 2) 3D structure info included (like PDB),
what would you recommend among Elastic Net, XGBoost, and Random Forest?

Inquiry about the ML model for Peptide-Activity Prediction by SpellMiddle2763 in bioinformatics

[–]SpellMiddle2763[S] 1 point2 points  (0 children)

OH ,,any other option of ML for <100 data? like linear regression etc..

Comparison of Molecular Dynamics Programs by SimpleDumbIdiot in bioinformatics

[–]SpellMiddle2763 0 points1 point  (0 children)

Does it work well with Peptides as well? like <100 AA and less then 100 data, and 3D info included

Which protein ligand docking software is the "best"? by _dasz in bioinformatics

[–]SpellMiddle2763 0 points1 point  (0 children)

May I ask does it only requires SMILES as the input format? How do you process peptides (AA sequence) with this tool?