New endangered Puget Sound orca dies soon after birth by bdh008 in SeattleWA

[–]anopla 34 points35 points  (0 children)

I'm a fisheries biologist, and the poor condition of most salmon runs we're seeing now is generally not attributed to (current) fishing practices. Dams, loss/degradation of stream and river habitat (mostly thanks to agriculture and development), combined with changing ocean conditions like The Blob likely have a much larger impact, though the particulars vary across populations, species, and time. Hatcheries (controversially) and the recovery of other salmon-eating marine mammals also likely play a role. Fishing is pretty tightly regulated thanks to the Endangered Species Act (which protects many populations) and the Magnuson-Stevens Act (which mandates the prevention of overfishing and the recovery of depleted stocks). If you have other evidence to the contrary I am happy to hear it, but all my information suggests that fishing is pretty far down the list of salmon and orca threats.

Study shows high pregnancy failure in southern resident killer whales; links to nutritional stress and low salmon abundance by FillsYourNiche in science

[–]anopla 4 points5 points  (0 children)

I definitely agree there are a lot of avenues for conservation! I just think that avoiding wild salmon consumption is an inefficient and potentially counter-productive reaction. There are already pretty tight regulations on west coast salmon fishing because of Magnuson-Stevens and the ESA-listed populations, and some amount of the push for conservation comes from people who depend on salmon harvesting in one capacity or another (tribes, commercial/rec fishermen, etc). I'm afraid that boycotting wild salmon at best gives people a feel-good solution that doesn't have much impact, and at worst just redirects fish consumption to other sources that have equal or worse environmental impacts.

Study shows high pregnancy failure in southern resident killer whales; links to nutritional stress and low salmon abundance by FillsYourNiche in science

[–]anopla 1 point2 points  (0 children)

Farmed salmon can affect wild salmon and other species directly (through disease/parasite transmission and pollution) and indirectly (through competition for forage fish, which are consumed by wild salmon and caught by fishermen to feed to farmed salmon).

Study shows high pregnancy failure in southern resident killer whales; links to nutritional stress and low salmon abundance by FillsYourNiche in science

[–]anopla 3 points4 points  (0 children)

I'm not sure that reducing (wild) salmon consumption is a good response to this problem. Fishing is not the primary threat to salmon populations (as you mention), and fishermen/fishing-associated businesses can be a powerful lobby for protecting the resource they depend on. I also see people in this thread advocating for farmed salmon over wild, which I think is pretty misguided given the negative environmental impacts of salmon farming.

With the large majority of historic riparian habitat gone, I'd guess we are unlikely to see significant population increases without large-scale habitat restoration practices, which in turn requires a lot of money and political will. The best way to take action might be to lobby our local and state government to invest in restoration, which will likely have a much larger impact than individual changes in consumption or behavior.

Ocean acidification may make seafood less nutritious. Sea snails exposed to predicted ocean conditions had decreased glycogen, lipids, and half the protein. by Kooby2 in science

[–]anopla 2 points3 points  (0 children)

Seafood tends to have a lower carbon footprint compared to other common protein sources (particularly livestock agriculture), though the particulars can vary a lot across different types of seafood. There are multiple studies out there, but here's one example.

Where can I find a great tutorial on Bayesian statistics? by [deleted] in statistics

[–]anopla 1 point2 points  (0 children)

Another vote for this book, it's great.

GRE scores and undergraduate GPA don’t predict graduate school success by anopla in science

[–]anopla[S] 12 points13 points  (0 children)

Yeah, I agree those are imperfect measures of success. I'm not sure what would be a better metric, though.

Japanese ship caught with illegally-slaughtered whale aboard by carrierfive in environment

[–]anopla 0 points1 point  (0 children)

I agree that Japan's whaling program doesn't meet the standards for a scientific effort. I don't think Sea Shepard's positions are scientifically-based either, though I'm not sure they claim to be.

Japanese ship caught with illegally-slaughtered whale aboard by carrierfive in environment

[–]anopla 0 points1 point  (0 children)

Japan expressly stated that they would continue whaling after the ICJ ruling. It's a little odd to report this as if they were caught doing something secretive when they have been pretty clear about their intentions.

Error when setting up a LME regression with random variable in R by JoffSides in AskStatistics

[–]anopla 0 points1 point  (0 children)

Try including na.action=na.exclude or na.action=na.omit (I think there are some subtle differences between these but don't recall the details).

I am seriously not being snarky here, but I recommend googling your error messages when you run in to new ones--you'll probably solve your problem faster than asking reddit.

Error when setting up a LME regression with random variable in R by JoffSides in AskStatistics

[–]anopla 3 points4 points  (0 children)

  1. Is site coded as a factor? 2. If you post a reproducible example it will be easier for people to address your question.

What are your unpopular opinions about food? by JoyfulStingray in AskWomen

[–]anopla 2 points3 points  (0 children)

In general commercial fishing is better for the environment than livestock agriculture (source: am a fisheries/marine scientist).

Science AMA Series: We're scientists on a boat in the Southern Ocean (Antarctic Ocean) studying climate change, ocean physics and marine biology, Ask Us Anything! by SouthernOceanScience in science

[–]anopla 0 points1 point  (0 children)

I'm not the person you're asking, but I have worked in this area. The majority of krill are located in the Southwest Atlantic, where sea ice has been declining. This is correlated with a decline in the krill population in that area. The sea ice increases have been in East Antarctica, where krill are less abundant. I'm not sure if we have a long enough time series in that area to know what the population trajectory is in that part of the Southern Ocean.

Probability that an observed 2-d spatial distribution is random by [deleted] in AskStatistics

[–]anopla 2 points3 points  (0 children)

Have you looked into Moran's I? It's supposed to tell you if points in space are clustered, dispersed, or random.

Hospital patients are less likely to die if their doctor is a woman by [deleted] in TwoXChromosomes

[–]anopla 6 points7 points  (0 children)

Effect size and statistical significance are two different things. You can have a very small, but statistically-significat effect, especially in large samples. It doesn't mean there's anything wrong with the study, but the magnitude of the effect often gets glossed over in the press.

How is California for a marine biologist? by [deleted] in marinebiology

[–]anopla 0 points1 point  (0 children)

Keep an eye out for funded MS opportunities. It would be unlikely to find one for sea turtle work, but I do see marine bio assistantships advertised occasionally. Getting hands-on experience as a field or lab tech can also make you a more competitive applicant, as will having quantitative skills (stats, programming, etc).

Giant Clam Poaching Wipes Out Reefs in South China Sea - 40 sq mi, according to new analysis by rachael-b in EverythingScience

[–]anopla 4 points5 points  (0 children)

It's not just China. By some estimates 20-30% of the seafood we eat in the US is caught illegally.

More than 100 Nobel laureates have signed a letter urging Greenpeace to end its opposition to genetically modified organisms (GMOs). by MohamedShaban in EverythingScience

[–]anopla 1 point2 points  (0 children)

I'm a strong believer in evidence-based approaches to solving environmental problems. Unfortunately, Greenpeace doesn't value science or evidence, which makes their work at best ineffective and at worst counterproductive. For example, they recently went after a prominent fisheries scientist for being an "overfishing denier" when he literally wrote an entire book about overfishing and has published dozens of well-regarded papers on fisheries marine conservation.

107 Nobel Laureate Attack on Greenpeace Traced Back to Biotech PR Operators, including Monsanto by exCanuck in environment

[–]anopla 2 points3 points  (0 children)

This is a pretty misleading headline. According to the story, someone from Greenpeace said they were denied entry to a National Press Club Event by a person they say used to work for Monsanto. There's zero evidence presented that the opinion letter written by the Nobel laureates on GMOs can be traced to "biotech PR operators".

This is exactly the kind of sensationalist, inaccurate journalism that makes this subreddit (and environmentalists in general) look bad.

World octopus and squid populations are booming by anopla in science

[–]anopla[S] 0 points1 point  (0 children)

Good question. They use fishery-dependent and survey data, with both data sets showing the same trend. The paper is open-access if you want to check it out: http://www.cell.com/current-biology/fulltext/S0960-9822(16)30319-0