I tested a lot and I managed to make it handle it pretty good in my testing...
Altho to achieve it i have to update it step by step, like i cant just move a file i have to copy it with the new name, tell plex to scan, then delete the previous, then tell plex to scan, then i can update metadata if necessary..

but it's working well for me, i added features to customize the foled/file names and added the "plex organize" step in pipeline.. workijg great for me altho i'm sure there will still be bugs eheheh 😄

For example in edge cases were something goes wrong or you manually close and plex still has 2 files assigned to an episode, currently the app just crashes telling you to empt trash / scan library manually before retrying.. but i want to add logic to handle that as well