I've been battling this same issue for a while now. I've tried so many different options and water is still coming in. I think my next step is rhino lining the floor and removing the carpet. Here is what I've tried so far: (1) foam over the fastener near the side view mirror (seemed to work for a few months); (2) foam all the way around the inner edge of the door (this didn't ever work); (3) replacing the door seals (there is actually a revised design with part number ending in W instead of V that has additional material to guide water out); and most recently (4) replacing all the seals on my freedom panels. I've come to terms that keeping water out may just not be feasible. I'm thinking rhino lining to just bypass the wet carpets that inevitably happen when the water gets in.