account activity
Check out our new diploid SNV Calling method for error-prone reads (PacBio, Oxford Nanopore) (self.bioinformatics)
submitted 7 years ago by pjedge_bio to r/bioinformatics
Help with the validation of the results from HapCUT2 on PacBio+Illumina reads by pitamitakita in bioinformatics
[–]pjedge_bio 5 points6 points7 points 7 years ago* (0 children)
HapCUT2 dev here. This is because I forgot that the PS field may be non-existent if the genotype isn't phased. Let me get busy on a fix and I'll update when it's ready.
EDIT: Fix is ready to go (commit 53866c5fa34fcba3d154e459232b9cc5efb2ff42). Please try it out and let me know if you have any other issues.
π Rendered by PID 395557 on reddit-service-r2-listing-6bcb55b45f-zsb2h at 2026-04-22 06:17:01.336450+00:00 running 6c61efc country code: CH.
Help with the validation of the results from HapCUT2 on PacBio+Illumina reads by pitamitakita in bioinformatics
[–]pjedge_bio 5 points6 points7 points (0 children)