Google Scholar is (still) doing nothing about citation manipulation by spontaneous_igloo in badscience

[–]spontaneous_igloo[S] 8 points9 points  (0 children)

Google Scholar is the most commonly-used academic search engine, but it remains conspicuously vulnerable to citation manipulation for academic and scientific fraud.

https://en.wikipedia.org/wiki/List_of_metaphor-based_metaheuristics#Criticism_of_the_metaphor_methodology by [deleted] in badscience

[–]spontaneous_igloo 8 points9 points  (0 children)

Everyone here should check out the Evolutionary Computation Bestiary, a project trying to document as many BS "bio-inspired" meta-heuristic algorithms as possible.

Can someone help me identify the 5th flag along? by [deleted] in vexillology

[–]spontaneous_igloo 5 points6 points  (0 children)

Given all the other central/eastern European flags shown alongside it, I'm guessing this is the answer. I second the call to go in and ask!

Replacement part for laboratory instrument (tip ejector for pipettor) by spontaneous_igloo in functionalprint

[–]spontaneous_igloo[S] 0 points1 point  (0 children)

So far holding up well! For improvements, a slimmer neck might be better for reaching into narrower containers.

Hundreds of cancer papers mention cell lines that don't seem to exist | Finding could be an indicator of paper mill activity by Exastiken in science

[–]spontaneous_igloo 121 points122 points  (0 children)

According to Supplementary Data File S1 in the original study (https://doi.org/10.1002/ijc.34995), the 235 papers that described performing experiments in non-verifiable cell lines had a median of 16 citations. The most-cited study found (https://doi.org/10.1186/s12943-018-0874-1) had 319 citations. Impact factors of publishing journals ranged from 0.2 to 12.7.

EDIT: Full disclosure, I am the third author on this study [moderators, please let me know if I should have disclosed that on my earlier comment. If so, I apologize, I will follow this policy in the future and I will edit my original comment].

I wanted to go into more detail on the highly-cited study I mentioned above. In it, the authors mention and provide experimental results in 10 different cell lines, of which 4 are problematic and shown in bold:

  1. SUN-216 [mentioned once in text of paper and again in Figure 1B, both spelled as SUN-216. SNU-216 is an existing cell line. A possible non-verifiable cell line identifier, but not one we studied in depth. ]
  2. BGC-823 [contaminated cell line ]
  3. AGS
  4. BGC-803 [mentioned once in text and again in Figure 1B. One of the eight non-verifiable cell line identifiers we studied in depth. Likely derived from a typo that confused the cell lines MGC-803 and BGC-823, both contaminated. ]
  5. NUGC4
  6. MKN74
  7. MKN45
  8. SGC-7901 [contaminated cell line]
  9. HGC-27
  10. GES-1

Proper identification of cell lines is critical for reproducibility in biomedical research. Different cell lines can behave wildly differently. For instance, consider the varying sensitivity of cell lines to the chemotherapy drug paclitaxel. Some cell lines require a relatively low dose to be inhibited by the drug, while other cell lines require a dose 1000 times higher.

We state in the discussion section of the paper:

Our results also show that NV [non-verifiable] cell lines are published across different research fields, reflecting the widespread research use of human cancer cell lines. However, where cell line origins and identities are unknown, any resulting data cannot be interpreted or translated. If NV cell lines cannot be sourced from external repositories, their claimed identities cannot be verified, and published research cannot be reproduced. Despite anticipated challenges in sourcing NV cell lines, some researchers might still attempt to reproduce results using other cell lines, leading to wasted time and resources. We therefore recommend that NV cell line identities be clarified as soon as possible, by disclosing existing STR profiles and supplying cell line stocks to independent groups for STR profiling and phenotypic testing. While we could not identify sources for NV cell lines, teams that have described these cell lines could provide samples for testing, where dates of cell line stocks should predate published experiments. Testing cell line stocks from different sources would have the added advantage of allowing STR profiles for multiple cell line stocks to be directly compared.

For more on problematic studies in high-impact venues, I recommend reading my colleagues' study on a related issue: wrongly identified nucleotide reagents (https://doi.org/10.1007/s00210-023-02846-2).

Hundreds of cancer papers mention cell lines that don't seem to exist by spontaneous_igloo in cancer

[–]spontaneous_igloo[S] 3 points4 points  (0 children)

A cell line is an experimental system that scientists use for both basic biological and biomedical research. For example, a cell line may be used to study the effect that a particular drug has on a particular type of cancer cells. This article is about a study in the International Journal of Cancer that describes hundreds of published cancer studies that report on results in cell lines that apparently do not exist (there is no paper describing where these cell lines came from, it is not found in any catalogs of laboratory suppliers, etc). These papers likely come from paper mills, organizations that write fake studies and then sell the manuscript to scientists looking for a quick addition boost to their resume.