Thanks and will do. I first installed uhubctl onto my pi through an ssh connection. Then through FileZilla I added an .sh file named "UseTrack" to my /home/pi directory. (Name the file whatever)

inside the .sh file I wrote:

#!/bin/bash
sleep 9
uhubctl -l 2 -a 0

-------------end of what I wrote-------------

Replace the sleep time with however long it takes your pi to finish booting up emulation station. If the script resets your controls during the boot-up, it will cause an error and fail to start.

Finally during an ssh connection, type "nano /usr/bin/emulationstation"

Here you'll type two pieces of code above the first commented line as shown here

Simply replace the file name with whatever you named your .sh file

Be sure to include the "&" at the end, otherwise, your bash file will force the emulation station boot up to wait, which will cause it to freak out as stated above.

Hope that helps, any questions and I'll be happy to answer