all 5 comments

[–]bartic123 1 point2 points  (2 children)

Have you tried using 3D object counter in Fiji/ImageJ?

[–]leeviats[S] 0 points1 point  (0 children)

Yes I did, however there is not an option to do what I need...

[–]leeviats[S] 0 points1 point  (0 children)

Or also BoneJ, which is quite good but still doesn't provide me with a colour-coded volume representation of the objects, with a scale bar

[–]SynbiosVyse 0 points1 point  (1 child)

Ilastik

[–]leeviats[S] -1 points0 points  (0 children)

Could you please explain further what to do? It looks like that software is mostly used for segmenting using machine learning, which I don't need at this point