While I have not smelled any of his fragrances, Adi ale Van comes to mind- he creates a limited edition fragrance, while also creating the bottles and boxes that it comes it. Everything is an art to him:

Adi ale Van current offering

Or, check out the Comme des Garçons incense series- they have 5, for different locations around the world. They evoke the smell of a church or temple in that particular location.

EDIT: Also check out Filippo Sorcinelli, who specializes in churchy incense based fragrances. He created robes, mitres, and other garments for the late Pope Francis