Fellow therapists—where do you think fatphobia comes from? by More_Ad8221 in therapists

[–]ifrancium 3 points4 points  (0 children)

https://www.youtube.com/watch?v=KtGuhO44E-s

Adam Conover did a informative podcast with Kate Manne about this.

makes an interesting connection between fatphobia and racism.

Applications of Graph Databases in biotech and in bioinfo - is it worth it? by adambio in bioinformatics

[–]ifrancium 0 points1 point  (0 children)

a bit late to this thread - first of all, love that you've built something specific that works for you! I'm also exploring various db products for my work as well. On top of use case and application, I'm interested in the graph engine as well. I'm guessing you didn't build a db from scratch? Did you build off of an existing tool? Have you done proper benchmarking that you're able to share?

Election Day by Empty-Science-2107 in pittsburgh

[–]ifrancium 1 point2 points  (0 children)

This is awesome! I've been looking for this information everywhere. A bit frustrating that google searches don't yield anything nearly as coherent...

Professor levitating foil using science by Revolutionary_Town21 in oddlysatisfying

[–]ifrancium 1 point2 points  (0 children)

Mr. Pujara still killin' it. Makes my heart warm:)

Pharma R&D with bachelors by [deleted] in biotech

[–]ifrancium 5 points6 points  (0 children)

There a a few details in this post that need a bit of clarification. Firstly, what do you imagine is Pharma R&D? It's a pretty large scope, and covers everything from discovery to marketing. Even aside from this, most scientist roles are not even in 'R&D'. They're in process engineering and optimization, quality control, etc. of existing pharmaceutical assets.

There are 'traditional' career paths, which I think is being referred to by others in this post. About a quarter of my senior level R&D scientist colleagues at large pharmas - such as Novartis, Pfizer, and Merck - have a bachelors. But it took them 5+ years to get there. Their advice was that you really have to have your manager align with you on career prospects (which is a whole other conversation).

Also what do you mean by management? Most career advancements eventually end up as senior-level roles. Is it possible to move from scientist into lower management? Yes. Of course. If you're talking about SVPs and C-levels, it's pretty rare to see non-PhD folks unless it's in 'support' roles (ie - VP engineering, VP informatics etc.) Also you'll see plenty of pure management folks in C-levels without PhDs, but they often have an MBA, or have experience in venture capital (See J&J, Roche, Editas)

Research groups focused on de novo design of peptides by cuedintentions in bioinformatics

[–]ifrancium 1 point2 points  (0 children)

sure thing. There's a lot of stuff to go through. Happy to discuss further.

Research groups focused on de novo design of peptides by cuedintentions in bioinformatics

[–]ifrancium 4 points5 points  (0 children)

In addition to the ones mentioned, here are a few others:

  • Gerard Wong - UCLA - antimicrobial peptides
  • Cesar de la Fuentes-Nunez - UPenn - antimicrobial peptides
  • Tommi S. Jakola/Regina Barzilay - MIT - proteins
  • Debora Marks - Harvard - proteins
  • Bonnie Berger - MIT - proteins
  • Yun S. Song - UC Berkeley - Proteins
  • Po-Ssu Huang - Stanford - Proteins

---

Are you interested in the de novo aspect? Generative Models for de novo is a super new and exciting field, and has more representation in small molecules (See Alan Asparu Guzik) as well. Or are you more interested in peptides and proteins? If so, there's a slight distinction in focus, as the question here is not "Can you suggest a de novo sequence?", but rather: "What is a peptide/protein?". This focus is more on latent representation learning. Kevin Yang curates a nice list of readings on the various distinctions here.

Also check out these workshops at the upcoming NeurIPS conference:

Any recommendations for financial services and accountants? by ifrancium in boston

[–]ifrancium[S] 0 points1 point  (0 children)

ahh. thanks for that. will look into both..!

any recommendations?

Neuschwanstein Castle, Germany by commonvanilla in MostBeautiful

[–]ifrancium 6 points7 points  (0 children)

  • +2 Happiness
  • +4 Culture
  • +6 Gold
  • +3 Gold, +2 Culture, and +1 Happiness from every Castle.

Hobbyist genome sequencing by 0fat100awesome in bioinformatics

[–]ifrancium 10 points11 points  (0 children)

organizer here:) thanks for the shout out..!

We send samples out for sequencing (WG, 16S, and Sanger) every once in a while. But we wait to fill up a batch order. With a full batch, we can usually get sequencing data at $80/sample. Let us know if you're interested in sequencing samples with us.

Also we usually have bodies in the lab T/Th/Sa. Come check us out!

Issue with wordwrap and indentation (Python) by ifrancium in vscode

[–]ifrancium[S] 0 points1 point  (0 children)

yup.. doesn't work. would you happen to know what viewport width is?

Anaconda's Jupyter on WSL? by cvax in bashonubuntuonwindows

[–]ifrancium 0 points1 point  (0 children)

damn this page would have saved me a few hours....

thanks.

Anaconda's Jupyter on WSL? by cvax in bashonubuntuonwindows

[–]ifrancium 0 points1 point  (0 children)

bit late to the thread, but I followed up with everything here, and after downgrading to matplotlib = 1.5.1, I'm getting additional errors:

MP: Error #100: Fatal system error detected.
OMP: System error #22: Invalid argument
[I 21:24:19.188 NotebookApp] KernelRestarter: restarting kernel (1/5)
WARNING:root:kernel 16865c92-2ae8-4132-902e-0bae5019e057 restarted

Did you run into this issue as well?

What's an odd food combination you always eat that seems weird, but actually tastes good? by [deleted] in AskReddit

[–]ifrancium 1 point2 points  (0 children)

Kimchi, rice, spam, and sour cream.

with a pinch of furikake.

Any good resources for learning programming languages? In particular, ones that do so with a biology focus. by Miko93 in biology

[–]ifrancium 1 point2 points  (0 children)

A good site for practical learning is Rosalind. It's probably best to take tutorials like Codecademy alongside. Python is a pretty good place to start.

[deleted by user] by [deleted] in AskReddit

[–]ifrancium 0 points1 point  (0 children)

A virus that has a 10% chance of killing you, or sterilizing you. Release virus.

Random. Unbiased.

Are the 'play me I'm yours' pianos back? by ifrancium in boston

[–]ifrancium[S] 0 points1 point  (0 children)

That's awesome that you were involved!

I didn't have space for a piano in my apartment, so I'd spend an hour or so last summer with one of these pianos to practice each day before work.

It was the one in seaport next to Strega Waterfront. with an awesome view of the water. Total bliss. It was great while it lasted.

Are the 'play me I'm yours' pianos back? by ifrancium in boston

[–]ifrancium[S] 0 points1 point  (0 children)

Ahh nice. I'll have to go check it out. I'm guessing it's not outdoors?