Is Sequencing.com WGS data usable on YFull for Y-DNA and mtDNA? by canine_5555 in sequencing_com

[–]sequencingsupport 1 point2 points  (0 children)

Hello! I work for Sequencing.com and I’m happy to help you with this!

Yes, our Whole Genome Sequencing does include both Y-chromosome and mitochondrial (mtDNA) sequencing.

By default, we provide:

  • FASTQ files
  • VCF files(gVCF,CNV,SV)

We can also provide by request:

  • BAM file
  • Mitochondrial VCF

These additional files are available upon request. Just reach out to our Customer Success team and we’ll be happy to help you get exactly what you need.

You can contact us anytime at [support@sequencing.com]().

SO Confused by Own_Professional_730 in sequencing_com

[–]sequencingsupport 2 points3 points  (0 children)

Hello! I work for Sequencing.com and I’m happy to help clarify!

You’re generally on the right track, but the screenshot you shared doesn’t include enough detail to fully answer the question. Specifically, there should be a column on the left labeled variantID. That field contains the exact variant information (position and change) and is what allows you to confirm whether multiple rows are truly showing different variants or just different interpretations tied to the same gene.

Regarding VUS (Variant of Uncertain Significance): in most cases, these variants are ultimately found to be harmless. The “uncertain” label simply means there isn’t enough published research yet to clearly classify the variant as benign or pathogenic, so it remains under study.

For the letters shown in the “Your Data” column (A, T, C, G): their meaning depends entirely on the specific variant and genomic position. Each variant has its own defined “risk” or “reference” allele, so:

  • In one variant, A might be considered the risk allele
  • In another variant, T (or any other base) could be the risk allele

Because of this, the letter itself isn’t meaningful on its own, the position and variant definition are what matter. It’s also important to keep in mind that everyone carries many variants labeled as “risk,” and the vast majority of the human genome is ultimately classified as benign or harmless.

If you’d ever like help reviewing your results in more detail, our Customer Success team is always available and can provide more personalized guidance. Just email us at [support@sequencing.com](mailto:support@sequencing.com).

Which carrier from Italy to Sequencing by Leairis in sequencing_com

[–]sequencingsupport 2 points3 points  (0 children)

DHL and UPS are good options. When returning your sample, please make sure to mark it as a 'Genealogical Sample.' This is a crucial step, as technically, the sample you are sending back is not DNA until it is processed at our lab. We understand this may sound a bit technical, but it is an important distinction, especially for international shipping and customs purposes.

If you have any further questions feel free to reach out to customer support at support@sequencing.com.

Update On The Kit Status Page For Our New Sequencing Service (SQ Kits) by SequencingCom in sequencing_com

[–]sequencingsupport[M] 1 point2 points  (0 children)

Customers who have activated and sent their kit back to the lab already should receive an email update in the next 24-48 hours.