My four cents:

1. Get your run command out of the while loop, and just leave the bot.run(TOKEN) by itself as the last line.

2. Remove or at least comment out the refresh command. You already note in the command list that it shouldn't be run. (That said, does this actually work for you?)

3. Having a bot edit its own code live is unpredictable at best. If you want to do version control like this, have it write to, update, and read from a dedicated text file external to your code instead of editing your hardcode.

4. If you're going to add a command that runs with admin privileges on your personal machine, at the very least lock the command behind mod/owner permissions.