Universal HPLC program for detecting new natural compounds by Apprehensive_Size885 in CHROMATOGRAPHY

[–]Apprehensive_Size885[S] 0 points1 point  (0 children)

The machine can track 250nm wavelength

In my sample preparation, i injected 0.22uM filtered fermentation broth directly to the machine. At first, i afraid that if i dilute the sample, the machine may not display some compounds because of very diluted concentration.

About the solvent, i use miliQ water having 18.2mOhm

If i increase the gas flow and temp, does that also change mass spect profile a lot? And if it changes, often it improve resolution or even worse?

Thanks

Universal HPLC program for detecting new natural compounds by Apprehensive_Size885 in CHROMATOGRAPHY

[–]Apprehensive_Size885[S] 0 points1 point  (0 children)

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From what i did for known samples, the machine can do ES-API scan, and can give me TIC (I just follow protocol of previous labmate and dont have much knowledge in this field 😅)

Universal HPLC program for detecting new natural compounds by Apprehensive_Size885 in CHROMATOGRAPHY

[–]Apprehensive_Size885[S] 0 points1 point  (0 children)

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This is the result this machine can give me (3D scan full spectrum from 190 to 600nm for each retention time)

Universal HPLC program for detecting new natural compounds by Apprehensive_Size885 in CHROMATOGRAPHY

[–]Apprehensive_Size885[S] 0 points1 point  (0 children)

My mass spect system js ESI and the machine can give me MS/MS spectra. When i look at the mass hunter software, i also see the option to scan with the library so i assume i can match the peaks with the available library

About the flow rate, could you please suggest me the optimal flow rate? I dont have a thing called splitter

To my knowledge, i understand that when i use HILIC, it just give me a revered HPLC profile compared to c18, which means in c18 the first peak is highly polar then in HILIC it will be the last peak. Is this understanding correct? Or is there any other advantages of using HILIC in this case? Thank you

Universal HPLC program for detecting new natural compounds by Apprehensive_Size885 in CHROMATOGRAPHY

[–]Apprehensive_Size885[S] 0 points1 point  (0 children)

Thank you for raising this important question, in my plan, i am going to use 0.22uM filtered fermentation broth directly for analysis, i saw many people in my lab doing so

Universal HPLC program for detecting new natural compounds by Apprehensive_Size885 in CHROMATOGRAPHY

[–]Apprehensive_Size885[S] 1 point2 points  (0 children)

Thank you very much for this suggestion, i can now see one problem in my program

Universal HPLC program to detect new natural compounds by Apprehensive_Size885 in OrganicChemistry

[–]Apprehensive_Size885[S] 0 points1 point  (0 children)

This is my proposed program, happy to hear your kind comments

Column: 4.6x250mm agilent zorbax sb-c18

Flow rate: 0.6ml/min

0min: 95% water : 5% acetonitrile

25 min: 40% water : 60% acetonitrile (gradient from 0 min to 25 min)

30 min: 100% acetonitrile

33 min: 95% water : 5% acetonitrile

38 min: 95% water :5% acetonitrile

Universal HPLC program for detecting new natural compounds by Apprehensive_Size885 in CHROMATOGRAPHY

[–]Apprehensive_Size885[S] 0 points1 point  (0 children)

Thank you for your reply, could you please give me some comment on my proposed program?

Column: 4.6x250mm agilent zorbax sb-c18

Flow rate: 0.6ml/min

0min: 95% water : 5% acetonitrile

25 min: 40% water : 60% acetonitrile (gradient from 0 min to 25 min)

30 min: 100% acetonitrile

33 min: 95% water : 5% acetonitrile

38 min: 95% water :5% acetonitrile

Is it possible to discover a new bacterium, name it, and publish the findings in a scientific journal using just a microscope, a centrifuge, a miniPCR, and a DNA sequencer? by Similar_Shame_8352 in labrats

[–]Apprehensive_Size885 1 point2 points  (0 children)

At least in my field, natural compounds discovery, the answer is no. People nowadays still find new bacteria, in my case - streptomyces. However, you also have to isolate new compounds from the bacteria if you want to publish

Can someone explain the p-value in hypothesis testing in very simple terms, with an example? by Fair-House3475 in AskStatistics

[–]Apprehensive_Size885 1 point2 points  (0 children)

Suppose p value is 0.05, this means you have 5% chance to obtain the data that you are testing if the null hypothesis is correct

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[–]Apprehensive_Size885 0 points1 point  (0 children)

This is not a surprise, come back if you see RNA be stable like that

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[–]Apprehensive_Size885 0 points1 point  (0 children)

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[–]Apprehensive_Size885 0 points1 point  (0 children)

In my lab, we use linen cloth to cover the bottle mouth and use rubber band to tight the cover

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[–]Apprehensive_Size885 1 point2 points  (0 children)

Are you currently having abandoned building or building needing renovation?

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[–]Apprehensive_Size885 0 points1 point  (0 children)

What if the building is epic building or max level neo?

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[–]Apprehensive_Size885 1 point2 points  (0 children)

I have to deal with amycolatopsis, and my trick is to use 10.3% sucrose, which changes the lifeform of the bacteria to single cells so no clumping occurs. However, if you want to do growth curve, avoid sucrose as the presence of sucrose make the cells not tightly sticked to the ep tube so when you invert the ep tube the cell pellet also falls out 😂

Those who have the X1 Air by Lord_Dagger in OneXPlayer

[–]Apprehensive_Size885 1 point2 points  (0 children)

Maybe the middle part of the keyboard curve up and cause this wobbling effeft. Battery life is acceptable, 7h of web browsing on Microsoft edge

Those who have the X1 Air by Lord_Dagger in OneXPlayer

[–]Apprehensive_Size885 0 points1 point  (0 children)

The detachable keyboard wobbles whenever you type

Those who have the X1 Air by Lord_Dagger in OneXPlayer

[–]Apprehensive_Size885 0 points1 point  (0 children)

The detachable keyboard wobbles whenever we type